TFBSPred: Transcription Factor Binding Site Prediction
What does TFBSPred do?
TFBSPred performs binding site prediction for transcription factors in a
gene of interest.
How do I cite TFBSPred?
The paper describing the tool is currently under preparation. In the
meantime we would be grateful if you can mention the URL where one can
access the tool.
What data are stored and where do they come from?
The database contains:
- Pairwise alignments between Homo sapiens and Mus musculus
genomes from the Ensembl Compara team from Ensembl
- DNaseI Hypersensitivity data from ENCODE
- TFFM data from JASPAR
- Homo sapiens and Mus musculus gene data from BioMart Ensembl